admixturegraph

admixturegraph is an R tool to fit and manipulate admixture graphs. The admixturegraph includes functions to visualize, build admixture graphs, and fitting parameters.

Topic

Data visualisation;Phylogenetics;Statistics and probability

Detail

  • Operation: Phylogenetic tree visualisation;Phylogenetic tree analysis

  • Software interface: Library

  • Language: R

  • License: GNU Public License v2

  • Cost: Free

  • Version name: 1.0.2

  • Credit: The Danish Council for Independent Research.

  • Input: -

  • Output: -

  • Contact: Thomas Mailund mailund@birc.au.dk

  • Collection: -

  • Maturity: -

Publications

  • admixturegraph: an R package for admixture graph manipulation and fitting.
  • Leppälä K, Nielsen SV, Mailund T. admixturegraph: an R package for admixture graph manipulation and fitting. Bioinformatics. 2017 Jun 1;33(11):1738-1740. doi: 10.1093/bioinformatics/btx048. PMID: 28158333; PMCID: PMC5447235.
  • https://doi.org/10.1093/bioinformatics/btx048
  • PMID: 28158333
  • PMC: PMC5447235

Download and documentation

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