Advanced Cell Classifier
Advanced Cell Classifier performs automated phenotypic classification of microscopy images using machine learning and image-analysis methods for high-content cellular analysis.
Key Features:
- Machine Learning Integration: Leverages machine learning algorithms to automate interpretation and classification of high-content imaging data.
- Image Analysis Capabilities: Applies image-analysis techniques to process microscopy images and quantify cellular phenotypes.
- Phenotype Discovery: Mines image datasets to identify novel and rare cellular phenotypes.
- Improved Recognition Performance: Refines recognition algorithms to increase accuracy and reliability of phenotype classification.
Scientific Applications:
- High-Content and High-Throughput Screening: Automates phenotype identification in high-content and high-throughput cell-based screening experiments.
- Large-Scale Dataset Analysis: Processes and analyzes large image datasets to support scalable phenotypic studies.
- Disease Mechanism and Cellular Response Studies: Facilitates discovery of phenotypes relevant to disease mechanisms and cellular responses.
- Quantitative Phenotypic Profiling: Enhances the precision of quantitative phenotypic profiling through improved classification accuracy.
Methodology:
Combines machine learning and image analysis to explore large high-content datasets, addresses the bottleneck of identifying relevant annotated examples for model training, and streamlines the training phase to adapt classifiers to new datasets and experimental conditions.
Topics
Details
- License:
- GPL-3.0
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- MATLAB
- Added:
- 8/4/2018
- Last Updated:
- 1/15/2019
Operations
Data Inputs & Outputs
Image analysis
Publications
Piccinini F, Balassa T, Szkalisity A, Molnar C, Paavolainen L, Kujala K, Buzas K, Sarazova M, Pietiainen V, Kutay U, Smith K, Horvath P. Advanced Cell Classifier: User-Friendly Machine-Learning-Based Software for Discovering Phenotypes in High-Content Imaging Data. Cell Systems. 2017;4(6):651-655.e5. doi:10.1016/j.cels.2017.05.012. PMID:28647475.