Advanced Cell Classifier
Advanced Cell Classifier performs automated phenotypic classification of microscopy images using machine learning and image-analysis methods for high-content cellular analysis.
Key Features:
- Machine Learning Integration: Leverages machine learning algorithms to automate interpretation and classification of high-content imaging data.
- Image Analysis Capabilities: Applies image-analysis techniques to process microscopy images and quantify cellular phenotypes.
- Phenotype Discovery: Mines image datasets to identify novel and rare cellular phenotypes.
- Improved Recognition Performance: Refines recognition algorithms to increase accuracy and reliability of phenotype classification.
Scientific Applications:
- High-Content and High-Throughput Screening: Automates phenotype identification in high-content and high-throughput cell-based screening experiments.
- Large-Scale Dataset Analysis: Processes and analyzes large image datasets to support scalable phenotypic studies.
- Disease Mechanism and Cellular Response Studies: Facilitates discovery of phenotypes relevant to disease mechanisms and cellular responses.
- Quantitative Phenotypic Profiling: Enhances the precision of quantitative phenotypic profiling through improved classification accuracy.
Methodology:
Combines machine learning and image analysis to explore large high-content datasets, addresses the bottleneck of identifying relevant annotated examples for model training, and streamlines the training phase to adapt classifiers to new datasets and experimental conditions.
Topics
Details
- License:
- GPL-3.0
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- MATLAB
- Added:
- 8/4/2018
- Last Updated:
- 1/15/2019
Operations
Publications
Piccinini F, Balassa T, Szkalisity A, Molnar C, Paavolainen L, Kujala K, Buzas K, Sarazova M, Pietiainen V, Kutay U, Smith K, Horvath P. Advanced Cell Classifier: User-Friendly Machine-Learning-Based Software for Discovering Phenotypes in High-Content Imaging Data. Cell Systems. 2017;4(6):651-655.e5. doi:10.1016/j.cels.2017.05.012. PMID:28647475.