aging mouse brain
aging mouse brain provides single-cell RNA sequencing datasets and analyses to characterize transcriptional changes across cell types in young versus old mouse brains.
Key Features:
- Single-Cell Resolution: Uses single-cell RNA sequencing to capture the transcriptional landscape of individual brain cells.
- Comprehensive Datasets: Contains gene expression profiles, pathway annotations, and ligand-receptor interaction data across diverse brain cell types.
- Aging-Related Gene Signatures: Identifies gene signatures that show coordinated variation across cell types and those regulated in a cell-type-specific manner.
- Cell-Type Specific Insights: Highlights transcriptional changes unique to each cell population, indicating distinct aging trajectories among cell types.
- Key Molecular Processes: Reports molecular processes implicated in brain aging, including ribosome biogenesis.
Scientific Applications:
- Neuroscience Research: Enables investigation of cellular and molecular mechanisms underlying brain aging.
- Disease Modeling: Informs modeling of age-related neurological disorders by revealing cell-type-specific aging processes.
- Biomarker Discovery: Supports identification of aging-related gene signatures that may serve as biomarkers for neurodegeneration.
Methodology:
Performed single-cell transcriptomic analysis on young and old mouse brains and analyzed resulting datasets to identify coordinated gene expression patterns and cell-type-specific regulatory mechanisms.
Topics
Details
- Added:
- 11/14/2019
- Last Updated:
- 12/9/2020
Operations
Publications
Ximerakis M, Lipnick SL, Innes BT, Simmons SK, Adiconis X, Dionne D, Mayweather BA, Nguyen L, Niziolek Z, Ozek C, Butty VL, Isserlin R, Buchanan SM, Levine SS, Regev A, Bader GD, Levin JZ, Rubin LL. Single-cell transcriptomic profiling of the aging mouse brain. Nature Neuroscience. 2019;22(10):1696-1708. doi:10.1038/s41593-019-0491-3. PMID:31551601.