AHMII
AHMII aggregates and indexes strain-level information for bacteria, fungi, yeasts, and cell lines across global culture collections and databases to support strain identification and reproducibility in microbial research.
Key Features:
- Comprehensive Database Access: Aggregates records from multiple global culture collections and microbial databases to centralize strain availability and identifiers.
- Strain Authentication: Provides metadata for type strain verification and strain identification to support reproducibility and fidelity checks.
- Integration of International Repositories: Integrates data from numerous international culture collections to enable global resource discovery and sharing.
- Data Aggregation and Metadata Harmonization: Collects and harmonizes metadata from diverse microbial repositories to enable cross-repository comparisons.
- Search Optimization and Cross-referencing: Implements advanced search algorithms and cross-referencing to facilitate rapid and precise retrieval of strain information.
- Regular Database Updates: Continuously updates records to reflect additions or changes in culture collections.
Scientific Applications:
- Microbial Genetics: Locate authenticated and well-characterized strains for genetic and molecular biology studies.
- Pathogen Research: Find pathogenic strains for infectious disease research, vaccine development, and antimicrobial resistance studies.
- Biotechnology: Access industrially relevant microbial strains used in fermentation processes and bio-production.
Methodology:
AHMII employs algorithmic integration and cross-referencing of data from diverse culture collections, including collecting and harmonizing metadata from microbial repositories, implementing advanced search algorithms for precise retrieval, and continuously updating database records to reflect additions or changes in culture collections.
Topics
Details
- Tool Type:
- web application
- Added:
- 3/25/2017
- Last Updated:
- 12/10/2018
Operations
Publications
Sugawara H and Miyazaki S. AHMII: Agent to Help Microbial Information Integration. Nucleic Acids Res. 2003; 31:3727-8. doi: 10.1093/nar/gkg523