ALICE
ALICE automates labeling of independent components in electroencephalography (EEG) recordings using Independent Component Analysis (ICA) to identify non-brain artifacts (e.g., eye movements, muscle) and functional oscillations such as alpha and mu rhythms for improved EEG analysis.
Key Features:
- Crowdsourcing Platform: Integrates crowdsourced visual labeling of independent components (ICs) drawn from public and proprietary EEG datasets to build labeled benchmarks.
- Supervised Machine Learning (ML): Supports training and re-training of supervised ML models on labeled IC subsets to optimize classification performance.
- Consensus Labeling Strategy: Implements a consensus mechanism to combine multiple expert labels and reduce variability in IC classification.
- ICA-based IC characterization: Uses ICA decomposition and IC attributes including time-series estimates, amplitude topography, and spectral power distribution for component description.
- Dynamic database for iterative refinement: Maintains an evolving IC database that updates with new labeled data to enable continuous model improvement.
Scientific Applications:
- Artifact Removal: Identification and removal of non-brain signal artifacts (e.g., eye movements, muscle) from EEG recordings to improve signal quality.
- Functional Oscillation Identification: Automatic detection of neural oscillations such as alpha and mu rhythms for analysis of brain activity patterns.
- Movement Artifact Detection in Specific Populations: Enables targeted ML model optimization for movement artifact detection in populations such as healthy or autistic children.
Methodology:
Decomposition of EEG signals using Independent Component Analysis (ICA); crowdsourced visual labeling of ICs and consensus aggregation of expert labels; supervised ML model training and re-training on labeled IC subsets using IC time-series estimates, amplitude topography, and spectral power distributions; continuous database updates for iterative algorithm refinement.
Topics
Details
- Tool Type:
- web application, workflow
- Added:
- 6/14/2021
- Last Updated:
- 8/9/2021
Operations
Publications
Soghoyan G, Ledovsky A, Nekrashevich M, Martynova O, Polikanova I, Portnova G, Rebreikina A, Sysoeva O, Sharaev M. A Toolbox and Crowdsourcing Platform for Automatic Labeling of Independent Components in Electroencephalography (ALICE). Unknown Journal. 2021. doi:10.1101/2021.04.06.438576.