Alloscore

Alloscore predicts binding affinities of allosteric ligand-protein interactions to support identification and optimization of allosteric modulators for drug discovery.


Key Features:

  • Predictive Capability: Alloscore employs computational methods to predict binding affinities between allosteric ligands and proteins.
  • Performance in Allosteric Binding Description: The tool demonstrates strong performance in characterizing allosteric binding interactions.
  • Application in Virtual Screening and Structural Optimization: Alloscore enables prioritization of compounds in virtual screening and aids structural optimization of allosteric agonists and antagonists.

Scientific Applications:

  • Allosteric modulator discovery: Supports discovery of allosteric modulators by predicting binding affinities and prioritizing candidate compounds.
  • Virtual screening prioritization: Facilitates compound ranking in virtual screening campaigns targeting allosteric sites.
  • Optimization for efficacy and safety: Aids structural optimization of allosteric agonists and antagonists to improve efficacy and specificity and to address limitations of orthosteric drugs such as off-target effects and toxicity.

Methodology:

Computational algorithms model binding affinities from structural data of ligand-protein complexes; models are trained and validated using known allosteric interactions.

Topics

Collections

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
8/3/2017
Last Updated:
3/26/2019

Operations

Data Inputs & Outputs

Publications

Li S, et al. Alloscore: a method for predicting allosteric ligand-protein interactions. Bioinformatics. 2016; 32:1574-6. doi: 10.1093/bioinformatics/btw036

PMID: 26803160

Documentation

Links