AngioQuant

AngioQuant quantifies angiogenesis in in vitro co-culture assays of endothelial cells and fibroblasts by automated image analysis to provide reproducible measurements of tubule structures for evaluation of anti-angiogenic and pro-angiogenic agents.


Key Features:

  • Automated Quantification: Performs automated image analysis to measure tubule complexes, including tubule lengths and sizes.
  • Junction Analysis: Identifies and counts junctions (branching points) within tubule networks to assess network connectivity.
  • Robustness to Illumination Variations: Maintains consistent measurement performance across varying illumination conditions.
  • Image Input: Processes images obtained from in vitro angiogenesis assays, including co-cultures of endothelial cells with fibroblasts.

Scientific Applications:

  • Cancer research and drug evaluation: Quantitatively evaluates stimulatory and inhibitory effects of candidate anti-angiogenic and pro-angiogenic compounds in endothelial cell–fibroblast co-culture assays.
  • Compound-specific analysis: Has been used to demonstrate the inhibitory effect of suramin and the stimulatory effect of vascular endothelial growth factor (VEGF) on angiogenesis.

Methodology:

Processes images from in vitro angiogenesis assays using automated image-analysis algorithms that measure tubule lengths and sizes and identify junctions within networks.

Topics

Details

Tool Type:
desktop application
Operating Systems:
Windows
Programming Languages:
MATLAB
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

Niemisto A, Dunmire V, Yli-Harja O, Wei Zhang, Shmulevich I. Robust quantification of in vitro angiogenesis through image analysis. IEEE Transactions on Medical Imaging. 2005;24(4):549-553. doi:10.1109/tmi.2004.837339. PMID:15822812.

Documentation

General
http://www.cs.tut.fi/sgn/csb/angioquant/
Downloadable PDF within homepage

Links