arakno

arakno retrieves and processes spider nomenclature, distribution, and trait data via an R package interfacing with the World Spider Catalogue (WSC), the World Spider Trait (WST), and the Global Biodiversity Information Facility (GBIF) to support taxonomic, biogeographic, and trait-based ecological and evolutionary analyses.


Key Features:

  • Integration with WSC, WST, and GBIF: Connects to the World Spider Catalogue (WSC), World Spider Trait (WST), and GBIF to access nomenclature, trait, and occurrence data.
  • Species name verification: Checks species names against WSC nomenclature to ensure taxonomic accuracy.
  • Distribution data retrieval and mapping: Obtains distribution records from WST and GBIF and supports generation of mapped representations of geographical occurrence.
  • Trait data download: Downloads detailed spider trait data from the World Spider Trait database for trait-based analyses.
  • Data preparation for analysis: Provides functions to prepare datasets for downstream statistical and comparative analyses.

Scientific Applications:

  • Nomenclatural validation: Validates and standardizes spider species names for taxonomic and biodiversity studies.
  • Biogeography and distribution modeling: Supplies occurrence and mapped distribution data for biogeographic assessments and habitat analyses.
  • Trait-based ecological and evolutionary studies: Enables assembly of trait datasets from WST for ecological, functional, and evolutionary research.
  • Statistical and comparative analyses: Produces analysis-ready datasets to support statistical tests and comparative phylogenetic studies.

Methodology:

Implements R functions to query the World Spider Catalogue, World Spider Trait, and GBIF for nomenclature, distribution, and trait data; verify species names against WSC; retrieve and map distribution records; download WST trait data; and prepare datasets for statistical analysis.

Topics

Details

License:
GPL-3.0
Tool Type:
library
Programming Languages:
R
Added:
3/28/2022
Last Updated:
3/28/2022

Operations

Data Inputs & Outputs

Data retrieval

Outputs

    Publications

    Cardoso P, Pekár S. arakno - An R package for effective spider nomenclature, distribution and trait data retrieval from online resources. The Journal of Arachnology. 2022;50(1). doi:10.1636/joa-s-21-024.

    Documentation