ARP wARP

ARP wARP automates macromolecular model building from crystallographic diffraction data to construct and complete protein, RNA/DNA, secondary structure, side chain, loop, solvent, and ligand models.


Key Features:

  • Automated Model Building: ARP wARP automates construction and completion of macromolecular models from crystallographic diffraction data.
  • Comprehensive Modeling Capabilities: Supports proteins, RNA/DNA, secondary structures, side chains, loops, solvent molecules, and ligands.
  • Advanced Algorithms: Employs algorithms to interpret complex crystallographic diffraction data objectively and reproducibly.
  • Integration with ArpNavigator: Interfaces with the molecular viewer ArpNavigator.

Scientific Applications:

  • Structural Biology Research: Interprets crystallographic data to build macromolecular models for understanding molecular structure and function.
  • Drug Discovery and Development: Models ligands and solvent molecules to support analysis of protein–ligand interactions relevant to drug design.
  • Biophysical Studies: Provides macromolecular structures for studies of physical properties and molecular dynamics.

Methodology:

ARP wARP employs advanced algorithms to automate interpretation of crystallographic diffraction data and macromolecular model construction. The software integrates with the molecular viewer ArpNavigator.

Topics

Collections

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Linux, Mac
Added:
2/16/2015
Last Updated:
11/25/2024

Operations

Publications

Langer GG, Hazledine S, Wiegels T, Carolan C, Lamzin VS. Visual automated macromolecular model building. Acta Crystallographica Section D Biological Crystallography. 2013;69(4):635-641. doi:10.1107/s0907444913000565. PMID:23519672. PMCID:PMC3606041.

Documentation