ASLPrep

ASLPrep preprocesses Arterial Spin Labeling (ASL) magnetic resonance imaging (MRI) data to produce reproducible measures of cerebral blood flow (CBF) for neuroimaging research.


Key Features:

  • Reproducibility and Generalizability: Ensures processing produces reproducible and generalizable outputs across studies and datasets for ASL MRI data.
  • Robustness to Protocol Variations: Accommodates variations in scan acquisition protocols to maintain reliable preprocessing across different ASL acquisition parameters.
  • Comprehensive Error and Output Reporting: Generates detailed error reports and interpretable output summaries to document preprocessing outcomes.

Scientific Applications:

  • Cerebral blood flow (CBF) quantification: Provides standardized preprocessing to enable accurate regional CBF measurement from ASL MRI.
  • Neurological disease research: Supports studies investigating perfusion alterations in neurological conditions.
  • Brain function and perfusion studies: Facilitates analyses of perfusion-related changes linked to brain function.
  • Multi-site studies and meta-analyses: Enables pooling and comparison of ASL datasets across sites for large-scale collaborative studies and meta-analyses.

Methodology:

Integrates state-of-the-art techniques in MRI data processing.

Topics

Details

License:
BSD-3-Clause
Tool Type:
workflow
Programming Languages:
Python
Added:
6/14/2021
Last Updated:
8/13/2021

Operations

Publications

Adebimpe A, Bertolero M, Dolui S, Cieslak M, Murtha K, Baller EB, Boeve B, Boxer A, Butler ER, Cook P, Colcombe S, Covitz S, Davatzikos C, Davila DG, Elliott MA, Flounders MW, Franco AR, Gur RE, Gur RC, Jaber B, McMillian C, Milham M, Mutsaerts HJ, Oathe DJ, Olm CA, Phillips JS, Tackett W, Roalf DR, Rosen H, Tapera TM, Tisdall MD, Esteban O, Poldrack RA, Detre JA, Satterthwaite TD. ASLPrep: A Generalizable Platform for Processing of Arterial Spin Labeled MRI and Quantification of Regional Brain Perfusion. Unknown Journal. 2021. doi:10.1101/2021.05.20.444998.

Documentation

Downloads

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