AGCOH

AGCOH curates a peer-reviewed internet journal, encyclopedia, and database aggregating gene-centric and cytogenetic information for oncology and haematology to support analysis of genes implicated in cancer, genetic abnormalities, histopathology, clinical diagnoses, and hereditary diseases prone to cancer.


Key Features:

  • Peer-reviewed resource: Aggregates peer-reviewed content as an internet journal, encyclopedia, and database focusing on genes implicated in cancer and related cytogenetic entities.
  • Gene-centric reviews: Provides detailed review articles covering genes, genetic abnormalities, histopathology, clinical diagnoses, and extensive iconography.
  • Cytogenetic focus: Documents karyotypic abnormalities and in situ hybridization techniques such as fluorescence in situ hybridization (FISH).
  • Genomic technologies: Incorporates data from comparative genomic hybridization and massive sequencing to enhance detection of genetic rearrangements.
  • Data integration: Links genes, genetic abnormalities, histopathology, clinical diagnoses, and external resources within a unified knowledge base.
  • Clinical utility: Supports cytogenetic diagnosis and informs treatment decision-making, with emphasis on rare diseases.
  • Educational materials: Includes teaching materials in genetics for training and instruction.
  • Research contribution: Contributes content relevant to broader genomic research initiatives and cancer epidemiology studies.

Scientific Applications:

  • Cytogenetic diagnosis: Reference for identification and interpretation of karyotypic abnormalities and FISH results in oncology and haematology.
  • Genetic research: Resource for investigating genes implicated in cancer, genetic rearrangements, and associated histopathology.
  • Clinical decision support: Evidence base to aid clinical interpretation and treatment considerations, particularly for rare cancer-associated hereditary conditions.
  • Education and training: Source of teaching materials and iconography for genetics and cytogenetics instruction.
  • Epidemiology and genomics: Supports analyses and reporting relevant to cancer epidemiology and broader genomic research initiatives.

Methodology:

Content and data derive from documentation of karyotypic abnormalities, fluorescence in situ hybridization (FISH), comparative genomic hybridization, and massive sequencing for detection of genetic rearrangements.

Topics

Details

License:
CC-BY-NC-ND-2.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Linux
Programming Languages:
Perl
Added:
3/2/2016
Last Updated:
11/25/2024

Operations

Data Inputs & Outputs

Query and retrieval

Publications

Huret J, Ahmad M, Arsaban M, Bernheim A, Cigna J, Desangles F, Guignard J, Jacquemot-Perbal M, Labarussias M, Leberre V, Malo A, Morel-Pair C, Mossafa H, Potier J, Texier G, Viguié F, Yau Chun Wan-Senon S, Zasadzinski A, Dessen P. Atlas of Genetics and Cytogenetics in Oncology and Haematology in 2013. Nucleic Acids Research. 2012;41(D1):D920-D924. doi:10.1093/nar/gks1082. PMID:23161685. PMCID:PMC3531131.

Huret J. Atlas of Genetics and Cytogenetics in Oncology and Haematology, year 2003. Nucleic Acids Research. 2003;31(1):272-274. doi:10.1093/nar/gkg126. PMID:12520000. PMCID:PMC165573.

Documentation