AutonoMS

AutonoMS automates ion mobility mass spectrometry (IM-MS) experiments to enable high-throughput acquisition, processing, and metabolomic fingerprinting workflows.


Key Features:

  • Automation and Integration: Automates running, processing, and analysis of IM-MS experiments and integrates with laboratory hardware.
  • Software Agent-Controlled Operations: Employs software agents to control measurement and analysis runs based on experimental specification files.
  • Specification File Support: Accepts experimental specification files that can be generated by human users or upstream software processes to define runs.
  • High-Throughput Capability: Supports flow-injection ion mobility configurations with sample analysis times as short as 5 seconds per sample.
  • Versatility and Adaptability: Can be adapted to other analytical instruments and data processing workflows beyond IM-MS.
  • Consistency and Reliability: Demonstrates reproducible operation across different experimental conditions.

Scientific Applications:

  • Targeted metabolomics: Enables automated targeted analyses in metabolomics experiments using IM-MS.
  • Untargeted metabolomics: Supports untargeted metabolomic fingerprinting workflows with high-throughput acquisition.
  • Standard and sample processing: Processes robotically prepared chemical standards and cultured yeast samples for analytical studies.
  • Closed-loop laboratory workflows: Facilitates development of automated and closed-loop experimental workflows in mass spectrometry research.

Methodology:

Automated software agents manage sample injection, data acquisition, processing, and analysis, with runs specified by experimental specification files produced by users or upstream software.

Topics

Details

Cost:
Free of charge
Tool Type:
workflow
Programming Languages:
Python
Added:
5/23/2024
Last Updated:
11/24/2024

Operations

Publications

Reder GK, Bjurström EY, Brunnsåker D, Kronström F, Lasin P, Tiukova I, Savolainen OI, Dodds JN, May JC, Wikswo JP, McLean JA, King RD. AutonoMS: Automated Ion Mobility Metabolomic Fingerprinting. Journal of the American Society for Mass Spectrometry. 2024;35(3):542-550. doi:10.1021/jasms.3c00396. PMID:38310603. PMCID:PMC10921458.

PMID: 38310603
Funding: - National Institute of Environmental Health Sciences: P42 ES027704 - Division of Biological Infrastructure: 2117782 - National Institutes of Health: R01 GM141277