AutoPrognosis 2.0
AutoPrognosis 2.0 automates construction and optimization of diagnostic and prognostic machine-learning models for clinical risk prediction.
Key Features:
- Automated Machine Learning (AutoML): Leverages AutoML to search and optimize end-to-end machine-learning pipelines and hyperparameters.
- Pipeline optimization and model configuration: Identifies optimal model configurations and pipeline components for predictive performance on complex datasets.
- Model explainability: Incorporates tools to enhance interpretability of model outputs and risk scores.
- Handling complex patient covariates: Captures complex interactions among patient covariates within predictive models.
- Clinical demonstrator deployment: Facilitates deployment of trained models as clinical demonstrators in healthcare settings.
Scientific Applications:
- Prognostic risk scores: Construction and validation of prognostic risk scores, exemplified by a diabetes risk model developed using UK Biobank (prospective study of over 500,000 individuals) that showed superior discrimination versus existing expert clinical risk scores.
- Personalized diagnostics: Development of personalized diagnostic tools and individualized risk prediction models for clinical decision support.
Methodology:
Uses automated machine learning techniques to develop and optimize predictive models by automating pipeline construction, handling complex datasets, identifying optimal model configurations, and incorporating model explainability tools.
Topics
Details
- License:
- Apache-2.0
- Cost:
- Free of charge
- Tool Type:
- library
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 1/29/2024
- Last Updated:
- 11/24/2024
Operations
Publications
Imrie F, Cebere B, McKinney EF, van der Schaar M. AutoPrognosis 2.0: Democratizing diagnostic and prognostic modeling in healthcare with automated machine learning. PLOS Digital Health. 2023;2(6):e0000276. doi:10.1371/journal.pdig.0000276. PMID:37347752. PMCID:PMC10287005.