AutoSolvate
AutoSolvate automates high-throughput quantum chemistry (QC) calculations for explicitly solvated molecules to generate solution-phase molecular properties at the quantum mechanical level.
Key Features:
- Automated Workflow: Automates solvated-structure generation, configuration sampling, and extraction of microsolvated cluster structures for downstream QC calculations.
- Machine Learning Integration: Incorporates machine learning models that predict solute–solvent closeness based on solute and solvent identities to guide initial structure generation.
- Force Field Fitting and Configuration Sampling: Performs force field fitting and configuration sampling to produce representative molecular configurations for quantum calculations.
- Microsolvated Cluster Extraction: Extracts microsolvated cluster structures prepared for use in quantum chemistry packages to predict molecular properties.
- High-throughput Explicit-Solvent QC: Supports large-scale explicit-solvent QC calculations for datasets intended for computational and data-driven studies.
Scientific Applications:
- Dataset Generation for AI-driven Design: Generates large, high-quality explicit-solvent quantum chemistry datasets for artificial intelligence–driven chemical design and discovery.
- Reorganization Energy Calculations: Has been applied to calculate outer-sphere reorganization energy for a dataset of 166 redox couples.
Methodology:
Solvated-structure generation aided by machine learning prediction of solute–solvent closeness, followed by force field fitting and configuration sampling, and extraction of microsolvated cluster structures for quantum chemistry analysis.
Topics
Details
- License:
- BSD-3-Clause
- Cost:
- Free of charge (with restrictions)
- Tool Type:
- workflow
- Operating Systems:
- Windows, Linux
- Programming Languages:
- Python
- Added:
- 7/17/2022
- Last Updated:
- 11/24/2024
Operations
Publications
Hruska E, Gale A, Huang X, Liu F. AutoSolvate: A toolkit for automating quantum chemistry design and discovery of solvated molecules. The Journal of Chemical Physics. 2022;156(12). doi:10.1063/5.0084833. PMID:35364887.
DOI: 10.1063/5.0084833
PMID: 35364887