BaMORC

BaMORC corrects ^13C chemical shift referencing errors in assigned and unassigned peak lists from protein NMR spectra to improve the accuracy of protein NMR data for structure and dynamics studies.


Key Features:

  • ^13C reference correction: Detects and corrects ^13C chemical shift referencing errors in peak lists derived from protein NMR spectra.
  • Assigned and unassigned peak list support: Operates on both assigned peak lists and unassigned peak lists.
  • Pre- and post-resonance assignment operation: Can be applied both before and after protein resonance assignment within analysis workflows.
  • Bayesian model optimization: Implements the Bayesian Model Optimized Reference Correction approach for reference detection and correction.
  • Pipeline integration: Provides an application programming interface (API) for integration into protein NMR data analysis pipelines.

Scientific Applications:

  • Protein structure determination: Ensures accurate ^13C chemical shift referencing required for reliable protein structure determination by NMR.
  • Resonance assignment workflows: Improves the quality of unassigned peak lists to support subsequent resonance assignment steps.
  • Structural biology and dynamics studies: Enhances NMR data quality used to investigate protein structures and dynamics.

Methodology:

Applies a Bayesian Model Optimized Reference Correction algorithm to detect and correct ^13C chemical shift referencing errors in assigned and unassigned peak lists from protein NMR spectra.

Topics

Details

License:
BSD-3-Clause
Tool Type:
library
Programming Languages:
R
Added:
6/14/2021
Last Updated:
8/13/2021

Operations

Publications

Chen X, Smelter A, Moseley HNB. BaMORC: A Software Package for Accurate and Robust <sup>13</sup>C Reference Correction of Protein NMR Spectra. Natural Product Communications. 2019;14(5). doi:10.1177/1934578x19849142. PMID:33936358. PMCID:PMC8087283.

Documentation

Links