BaMORC
BaMORC corrects ^13C chemical shift referencing errors in assigned and unassigned peak lists from protein NMR spectra to improve the accuracy of protein NMR data for structure and dynamics studies.
Key Features:
- ^13C reference correction: Detects and corrects ^13C chemical shift referencing errors in peak lists derived from protein NMR spectra.
- Assigned and unassigned peak list support: Operates on both assigned peak lists and unassigned peak lists.
- Pre- and post-resonance assignment operation: Can be applied both before and after protein resonance assignment within analysis workflows.
- Bayesian model optimization: Implements the Bayesian Model Optimized Reference Correction approach for reference detection and correction.
- Pipeline integration: Provides an application programming interface (API) for integration into protein NMR data analysis pipelines.
Scientific Applications:
- Protein structure determination: Ensures accurate ^13C chemical shift referencing required for reliable protein structure determination by NMR.
- Resonance assignment workflows: Improves the quality of unassigned peak lists to support subsequent resonance assignment steps.
- Structural biology and dynamics studies: Enhances NMR data quality used to investigate protein structures and dynamics.
Methodology:
Applies a Bayesian Model Optimized Reference Correction algorithm to detect and correct ^13C chemical shift referencing errors in assigned and unassigned peak lists from protein NMR spectra.
Topics
Details
- License:
- BSD-3-Clause
- Tool Type:
- library
- Programming Languages:
- R
- Added:
- 6/14/2021
- Last Updated:
- 8/13/2021
Operations
Publications
Chen X, Smelter A, Moseley HNB. BaMORC: A Software Package for Accurate and Robust <sup>13</sup>C Reference Correction of Protein NMR Spectra. Natural Product Communications. 2019;14(5). doi:10.1177/1934578x19849142. PMID:33936358. PMCID:PMC8087283.