BayesCTDesign
BayesCTDesign provides Bayesian design and simulation capabilities in R for two-arm randomized trials, enabling incorporation of historical control data and power estimation across Gaussian, Poisson, Bernoulli, Weibull, Lognormal, and piecewise exponential outcomes.
Key Features:
- Bayesian framework: Integrates prior information, including historical control data, with current trial data within a Bayesian inferential framework.
- Integration of Historical Control Data: Incorporates historical control data as prior information to inform analyses of two-arm randomized trials.
- Simulation functions: Provides historic_sim() for scenarios with historical controls and simple_sim() for scenarios without, to simulate trial characteristics under user-defined scenarios.
- Outcome flexibility: Supports Gaussian, Poisson, Bernoulli, Weibull, Lognormal, and Piecewise Exponential (pwe) outcome models.
- Power estimation via simulation: Estimates power for two-sided hypothesis tests at a user-defined alpha by simulation, using 95% credible intervals for the treatment effect to assess rejection of the null.
Scientific Applications:
- Clinical trial design: Planning and evaluating two-arm randomized clinical trials with or without available historical controls.
- Randomized controlled trials: Assessing trial characteristics and operating characteristics for two-arm RCTs under varied assumptions and outcome models.
- Applied research across domains: Applying Bayesian simulation-based trial design to medical studies and ecological research that require Gaussian, count, binary, survival, or lognormal outcome modeling.
Methodology:
Operates within a Bayesian framework using prior (historical) information when available; implements simulation-based power estimation where each replication compares a 95% credible interval for the treatment effect to a null value to determine rejection, and provides the simulation functions historic_sim() and simple_sim() for data-generating scenarios.
Topics
Details
- License:
- GPL-3.0
- Cost:
- Free of charge
- Tool Type:
- library
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- R
- Added:
- 6/9/2022
- Last Updated:
- 6/9/2022
Operations
Data Inputs & Outputs
Publications
Eggleston BS, Ibrahim JG, McNeil B, Catellier D. <b>BayesCTDesign</b>: An <i>R</i> Package for Bayesian Trial Design Using Historical Control Data. Journal of Statistical Software. 2021;100(21). doi:10.18637/jss.v100.i21. PMID:34975350. PMCID:PMC8715862.