BayesForest
BayesForest generates realistic morphological tree clones from laser scanning data to model and compare tree morphology using a multipurpose procedural stochastic growth model and a structural distance metric.
Key Features:
- Detailed Reconstruction: BayesForest utilizes laser scanning data for precise reconstruction of tree morphology.
- Statistical Measure of Similarity: The algorithm incorporates a structural distance metric to compare pairs of trees and quantify morphological similarity.
- Stochastic Growth Model: BayesForest employs a multipurpose procedural stochastic growth model that can be adjusted to replicate specific morphological characteristics of measured trees.
- Programmable Interface: The implementation includes a programmable interface for manipulation of the data inputs required by the algorithm.
Scientific Applications:
- Ecology and Forestry: Analysis of how variations in tree morphology influence landscape formation, habitat creation, and eco-physiological characteristics.
- Plant Science Research: Exploration of the morphological potential of growth models and replication of experimentally measured tree forms for theoretical and experimental studies.
Methodology:
Reconstruction of tree forms from laser scanning data; quantification of structural similarities using the structural distance metric; generation of tree clones via a multipurpose procedural stochastic growth model adjustable to observed morphologies.
Topics
Details
- License:
- MIT
- Tool Type:
- library
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- MATLAB
- Added:
- 7/15/2018
- Last Updated:
- 11/25/2024
Operations
Publications
Potapov I, Järvenpää M, Åkerblom M, Raumonen P, Kaasalainen M. Bayes Forest: a data-intensive generator of morphological tree clones. GigaScience. 2017;6(10). doi:10.1093/gigascience/gix079. PMID:29020742. PMCID:PMC5632294.