BEASTling
BEASTling converts human-readable linguistic configuration files into BEAST 2 XML to prepare Bayesian phylogenetic analyses of linguistic data.
Key Features:
- Configuration-to-XML conversion: Transforms human-readable linguistic configuration files into BEAST 2 XML for specifying Bayesian phylogenetic analyses.
- Glottolog integration and monophyly constraints: Leverages Creative Commons-licensed Glottolog data to filter datasets by recognized language families and to impose monophyly constraints consistent with Glottolog classifications.
- Geographic and phylogeographic data assignment: Assigns geographic location data to languages to support phylogeographic analyses of spatial distribution and migration.
- Support for the Cross-Linguistic Linked Data Format (CLDF): Ingests CLDF-formatted cross-linguistic datasets for incorporation into Bayesian analyses.
Scientific Applications:
- Historical linguistics: Preparing and running Bayesian phylogenetic analyses to infer language trees and test hypotheses about language relationships.
- Phylogeography: Analyzing spatial patterns and historical migration by integrating language-level geographic data into phylogenetic models.
- Comparative linguistics using CLDF: Incorporating CLDF datasets to perform comparative and cross-linguistic analyses within a Bayesian framework.
- Constraint-based phylogenetic inference: Enforcing Glottolog-derived monophyly constraints to assess compatibility between inferred trees and established classifications.
Methodology:
Transforms configuration files into BEAST 2 XML; integrates Creative Commons-licensed Glottolog data to filter by language family and impose monophyly constraints; assigns geographic location data to languages; and accepts CLDF-formatted datasets.
Topics
Details
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Mac
- Programming Languages:
- Python
- Added:
- 6/6/2018
- Last Updated:
- 11/25/2024
Operations
Publications
Maurits L, Forkel R, Kaiping GA, Atkinson QD. BEASTling: A software tool for linguistic phylogenetics using BEAST 2. PLOS ONE. 2017;12(8):e0180908. doi:10.1371/journal.pone.0180908. PMID:28796784. PMCID:PMC5552126.