beeRapp
beeRapp performs automated high-throughput exploratory analysis of multivariate behavioral data for animal behavioral studies.
Key Features:
- R Shiny implementation: Implemented as an R Shiny application for computational analysis of behavioral datasets.
- Automated analysis techniques: Supports clustering, dimensionality reduction (e.g., principal component analysis), and inferential statistics.
- Visualization capabilities: Produces large numbers of output plots including boxplots, heatmaps, correlation matrices, and pairwise comparisons.
- High-throughput processing: Automates analysis workflows to handle large volumes of multivariate behavioral data.
- Standardization and reproducibility: Provides standardized analysis and visualization workflows to support reproducible results.
Scientific Applications:
- Animal behavioral studies: Exploratory and inferential analysis of high-dimensional, multivariate behavioral datasets to identify patterns, relationships, and correlations.
Methodology:
Computational methods explicitly include clustering, dimensionality reduction (principal component analysis), inferential statistics, and generation of boxplots, heatmaps, correlation matrices, and pairwise comparisons; implemented as an R Shiny application.
Topics
Details
- License:
- GPL-3.0
- Cost:
- Free of charge
- Tool Type:
- desktop application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- R
- Added:
- 11/8/2023
- Last Updated:
- 11/24/2024
Operations
Publications
Busch AM, Kovlyagina I, Lutz B, Todorov H, Gerber S. beeRapp: an R shiny app for automated high-throughput explorative analysis of multivariate behavioral data. Bioinformatics Advances. 2022;2(1). doi:10.1093/bioadv/vbac082. PMID:36699414. PMCID:PMC9710645.