BEXIS2

BEXIS2 manages research data for biodiversity, ecology, and environmental science projects across the data lifecycle.


Key Features:

  • Data lifecycle support: Supports data structure design, data collection, discovery, dissemination, integration, quality assurance, and research planning.
  • Modular, extensible architecture: Provides a modular framework that can be customized and extended, including adaptations to database schemas and new functional modules.
  • FAIR alignment: Implements principles of Findable, Accessible, Interoperable, and Reusable data management, with a self-assessment reporting strong conformance to Findability and Accessibility, moderate support for Interoperability, and partial Reusability.
  • Scalability: Intended for mid- to large-scale projects with multiple sub-projects and support for up to several hundred researchers.
  • Heterogeneous data integration: Handles fragmented and heterogeneous data formats and facilitates integration of diverse datasets.
  • Tabular-data focus and adaptability: Initially focused on tabular data while providing a generic framework adaptable to other fields and data types.
  • Data and artefact preservation: Supports secure storage and availability of raw data, metadata, processed data, software, code, and associated materials.
  • Community deployments: Demonstrated capacity through community deployment examples across biodiversity and ecological research projects.

Scientific Applications:

  • Biodiversity research: Management and integration of heterogeneous biodiversity datasets, including tabular data.
  • Ecology research: Support for ecological datasets across data collection, quality assurance, integration, and dissemination activities.
  • Environmental sciences: Management and publication of environmental research data across the research lifecycle.
  • Collaborative research projects: Coordination and data management for projects composed of multiple sub-projects and large numbers of researchers.
  • FAIR-aligned data publication: Enabling data publication and dissemination in line with FAIR principles.

Methodology:

Provides modular software components for data structure design, collection, discovery, dissemination, integration, and quality assurance within a modular, extensible architecture.

Topics

Details

License:
LGPL-3.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Windows
Programming Languages:
C#, JavaScript
Added:
2/11/2022
Last Updated:
2/11/2022

Operations

Publications

Chamanara J, Gaikwad J, Gerlach R, Algergawy A, Ostrowski A, König-Ries B. BEXIS2: A FAIR-aligned data management system for biodiversity, ecology and environmental data. Biodiversity Data Journal. 2021;9. doi:10.3897/bdj.9.e72901. PMID:34785977. PMCID:PMC8589773.

Documentation

Installation instructions', 'General', 'Release notes', 'API documentation
https://github.com/BEXIS2
BEXIS2 Tech Talks are available at https://www.youtube.com/channel/UC_yQqVdDxYoygk6snNcuAmw BEXIS2 demo website- https://demo.bexis2.uni-jena.de/

Downloads

Links

Repository', 'Issue tracker
https://github.com/BEXIS2