BEXIS2
BEXIS2 manages research data for biodiversity, ecology, and environmental science projects across the data lifecycle.
Key Features:
- Data lifecycle support: Supports data structure design, data collection, discovery, dissemination, integration, quality assurance, and research planning.
- Modular, extensible architecture: Provides a modular framework that can be customized and extended, including adaptations to database schemas and new functional modules.
- FAIR alignment: Implements principles of Findable, Accessible, Interoperable, and Reusable data management, with a self-assessment reporting strong conformance to Findability and Accessibility, moderate support for Interoperability, and partial Reusability.
- Scalability: Intended for mid- to large-scale projects with multiple sub-projects and support for up to several hundred researchers.
- Heterogeneous data integration: Handles fragmented and heterogeneous data formats and facilitates integration of diverse datasets.
- Tabular-data focus and adaptability: Initially focused on tabular data while providing a generic framework adaptable to other fields and data types.
- Data and artefact preservation: Supports secure storage and availability of raw data, metadata, processed data, software, code, and associated materials.
- Community deployments: Demonstrated capacity through community deployment examples across biodiversity and ecological research projects.
Scientific Applications:
- Biodiversity research: Management and integration of heterogeneous biodiversity datasets, including tabular data.
- Ecology research: Support for ecological datasets across data collection, quality assurance, integration, and dissemination activities.
- Environmental sciences: Management and publication of environmental research data across the research lifecycle.
- Collaborative research projects: Coordination and data management for projects composed of multiple sub-projects and large numbers of researchers.
- FAIR-aligned data publication: Enabling data publication and dissemination in line with FAIR principles.
Methodology:
Provides modular software components for data structure design, collection, discovery, dissemination, integration, and quality assurance within a modular, extensible architecture.
Topics
Details
- License:
- LGPL-3.0
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Windows
- Programming Languages:
- C#, JavaScript
- Added:
- 2/11/2022
- Last Updated:
- 2/11/2022
Operations
Publications
Chamanara J, Gaikwad J, Gerlach R, Algergawy A, Ostrowski A, König-Ries B. BEXIS2: A FAIR-aligned data management system for biodiversity, ecology and environmental data. Biodiversity Data Journal. 2021;9. doi:10.3897/bdj.9.e72901. PMID:34785977. PMCID:PMC8589773.
DOI: 10.3897/BDJ.9.e72901
Documentation
Installation instructions', 'General', 'Release notes', 'API documentation
https://github.com/BEXIS2BEXIS2 Tech Talks are available at https://www.youtube.com/channel/UC_yQqVdDxYoygk6snNcuAmw
BEXIS2 demo website- https://demo.bexis2.uni-jena.de/
Downloads
- Source codehttps://github.com/BEXIS2
Links
Repository', 'Issue tracker
https://github.com/BEXIS2