BIDSonym
BIDSonym automates pseudo-anonymization of neuroimaging datasets as a BIDSapp to reduce participant re-identification risk and ensure compliance with Ethics Review Boards and data-sharing platforms.
Key Features:
- Automated Pseudo-Anonymization: Automates the pseudo-anonymization of neuroimaging datasets to reduce participant re-identification risk.
- Support for Multiple De-Identification Procedures: Accommodates multiple de-identification strategies across different datasets and research needs.
- Comprehensive Metadata Handling: Processes neuroimaging files and accompanying metadata, gathering and evaluating metadata to assess potentially sensitive information.
- Reproducibility and Scalability: Leverages the Brain Imaging Data Structure (BIDS) to enable reproducible application across studies and is agnostic to dataset scale.
- In-Depth Sensitivity Assessment: Produces outputs that enable detailed evaluations of sensitive information within datasets.
Scientific Applications:
- Ethical-compliant Data Sharing: Supports sharing of neuroimaging datasets that adhere to Ethics Review Boards and data-sharing platform requirements by reducing re-identification risk.
- Open Science and Reproducibility: Standardizes pseudo-anonymization within the BIDS framework to support open science, reproducibility, and sustainability in neuroimaging studies.
- Privacy-preserving Large-scale Studies: Enables sharing of both small-scale studies and large-scale neuroimaging projects while preserving participant privacy.
Methodology:
BIDSonym is implemented as a BIDSapp that processes neuroimaging files and accompanying metadata, gathers and evaluates metadata information, and produces outputs for in-depth sensitivity assessment.
Topics
Details
- License:
- BSD-3-Clause
- Tool Type:
- command-line tool
- Added:
- 6/14/2021
- Last Updated:
- 8/13/2021
Operations
Publications
Herholz P, Ludwig RM, Poline J. BIDSonym - a BIDSapp for the pseudo-anonymization of neuroimaging datasets. Unknown Journal. 2021. doi:10.31234/osf.io/3aknq.
Documentation
User manual
https://peerherholz.github.io/BIDSonym/Downloads
- Container filehttps://hub.docker.com/r/peerherholz/bidsonym
Links
Issue tracker
https://github.com/PeerHerholz/BIDSonym/issues