bioBakery Workflows

bioBakery workflows is a collection of workflows for common microbial community analyses using standardized tools and parameters, performing quality control and generating summary statistics.

Topics

Details

License:
MIT
Maturity:
Mature
Cost:
Free of charge
Tool Type:
workflow
Operating Systems:
Linux
Programming Languages:
Python
Added:
4/20/2026
Last Updated:
4/20/2026

Operations

Data Inputs & Outputs

Publications

Documentation

Command-line options', 'Installation instructions
https://github.com/biobakery/biobakery_workflows

Links