Bioc.gff
Bioc.gff parses GFF and GTF files using C++ classes and provides utilities to read and write GFF3 files for describing genes and other features of DNA, RNA, and protein sequences.
Key Features:
- GFF and GTF Parsing: Parses GFF and GTF files using C++ classes.
- GFF3 File I/O: Provides utilities to read and write GFF3 files.
Scientific Applications:
- Genome Feature Annotation: Supports description of genes and other features of DNA, RNA, and protein sequences in genome analysis workflows.
Methodology:
File parsing is implemented using C++ classes.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 8/30/2026
- Last Updated:
- 8/30/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/Bioc.gffDownloads
- Source codehttps://github.com/Bioconductor/Bioc.gff