BiocSet
BiocSet represents different biological sets in a triple tibble format comprising `element`, `set`, and `elementset` tibbles, enabling activation of individual tibbles for dplyr-based manipulation, mapping functionality, and web reference access.
Key Features:
- Triple tibble structure: Organizes biological sets into three linked tibbles (`element`, `set`, and `elementset`) for structured data representation.
- Active tibble selection: Allows activation of one of the three tibbles to perform common functions from the dplyr package.
- Mapping functionality: Provides mapping capabilities for elements and sets.
- Web reference access: Enables accessing web references for elements and sets.
Scientific Applications:
- Biological set representation: Displays and manages different biological sets in an integrated, queryable format.
- Data manipulation of biological sets: Facilitates dplyr-based filtering, transformation, and analysis of biological set components.
Methodology:
BiocSet implements a triple tibble data structure with activation-based access to enable dplyr operations on biological sets.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/BiocSet