cellmigRation
cellmigRation imports TIFF images of fluorescently labeled cells, tracks cell movements over time, and enables in-depth trajectory analysis for quantitative cell migration studies.
Key Features:
- TIFF Image Import: Supports importing TIFF images of fluorescently labeled cells for processing.
- Cell Tracking: Tracks cell movements over time from imported image sequences.
- Parallelization: Supports parallel processing for image processing and fast computation of cell trajectories.
- Trajectory Analysis: Provides 15 trajectory analysis functions for in-depth analysis of cell trajectories.
Scientific Applications:
- Cell Migration Studies: Quantifies and analyzes cell movement dynamics from time-lapse fluorescence microscopy data.
Methodology:
The tool imports TIFF images of fluorescently labeled cells, applies parallelized image processing, computes cell trajectories, and analyzes them using 15 trajectory analysis functions.
Collections
Details
- License:
- GPL-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
Downloads
- Source codehttps://github.com/ocbe-uio/cellmigRation/