clevRvis

clevRvis provides visualization techniques and algorithms for analyzing clonal evolution.

Key Features:

• Shark plots: Visualization technique for clonal evolution.
• Dolphin plots: Visualization technique for clonal evolution.
• Plaice plots: Visualization technique for clonal evolution.
• Time point interpolation: Algorithms for interpolating time points are provided.
• Therapy effect estimation: Algorithms for estimating therapy effects are provided.
• Phylogeny-aware color coding: Color coding that accounts for phylogenetic relationships is implemented.

Scientific Applications:

• Clonal evolution analysis: Visualization and computational analysis of clonal evolution patterns.

Methodology:

Algorithms for time point interpolation and therapy effect estimation; phylogeny-aware color coding.