divergence
divergence simplifies high-dimensional omics data into binary or ternary formats that encapsulate how data diverges from a specified baseline group with the same univariate or multivariate features.
Key Features:
- Divergence analysis: Performs divergence analysis as presented in Dinalankara et al, "Digitizing omics profiles by divergence from a baseline", PNAS 2018.
- Data digitization: Transforms high-dimensional omics data into binary or ternary formats.
- Baseline comparison: Quantifies divergence of samples from a specified baseline group.
- Feature flexibility: Supports both univariate and multivariate features for divergence assessment.
Scientific Applications:
- Omics data simplification: Reduces complexity of high-dimensional omics datasets for downstream analysis.
- Baseline-centered profiling: Enables digitization of omics profiles relative to a reference or control group.
Methodology:
Divergence analysis as described in Dinalankara et al, PNAS 2018.
Collections
Details
- License:
- GPL-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/divergence