funOmics

funOmics aggregates or summarizes omics data into higher-level functional representations such as GO terms, gene sets, or KEGG metabolic pathways.

Key Features:

• Functional aggregation: Transforms omics data into functional activity scores representing GO terms, gene sets, or KEGG metabolic pathways.
• Dimensionality reduction: Produces aggregated data matrices that reduce dimensionality while preserving biological information.
• Functional activity scoring: Generates coordinated functional activity scores that can be as informative as single molecule measurements.

Scientific Applications:

• Functional molecular set analysis: Facilitates analysis of functional molecular sets through aggregated functional activity scores.
• Biological interpretation: Enables faster and easier biological interpretation of omics data through higher-level functional representations.

Methodology:

The package aggregates or summarizes omics data into higher-level functional representations to generate functional activity scores.