GenomicCoordinates
GenomicCoordinates extends string parsing capabilities for genomic coordinates, supporting various formats including comma-separated numbers, space-delimited coordinates, and automatic detection of GRanges, GPos, and GInteractions objects.
Key Features:
- Comma-separated number parsing: Supports parsing of genomic coordinates formatted as comma-separated numbers.
- Space-delimited coordinate parsing: Supports parsing of genomic coordinates formatted with space delimiters.
- Automatic object detection: Automatically detects GRanges, GPos, and GInteractions objects.
Scientific Applications:
- Genomic coordinate parsing: Facilitates standardized parsing of diverse genomic coordinate string formats for downstream genomic analyses.
Methodology:
String parsing methods for genomic coordinates with automatic format detection and object type identification.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 8/30/2026
- Last Updated:
- 8/30/2026
Operations
Publications
Documentation
Downloads
- Source codehttps://github.com/js2264/GenomicCoordinates