ggsc
ggsc provides visualization functions for single cell and spatial transcriptomics data using grammar of graphics syntax.
Key Features:
- Object Support: Visualizes Seurat, SingleCellExperiment, and SpatialExperiment objects.
- Grammar of Graphics Implementation: Uses ggplot2 syntax for generating visualizations.
Scientific Applications:
- Single Cell Transcriptomics Visualization: Generates plots from single cell gene expression data.
- Spatial Transcriptomics Visualization: Generates plots from spatially resolved gene expression data.
Methodology:
Implements grammar of graphics syntax through ggplot2 for visualization of single cell and spatial data objects.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/ggscDownloads
- Source codehttps://github.com/YuLab-SMU/ggsc
- Source codehttps://yulab-smu.top/ggsc/