ggseqalign

ggseqalign generates minimal visualizations of sequence alignments for DNA sequences, amino acid sequences, and arbitrary strings.

Key Features:

• Sequence Compatibility: Supports alignments of DNA sequences, amino acid sequences, and arbitrary strings.
• Biostrings Integration: Compatible with the Biostrings package for biological sequence handling.
• ggplot2 Integration: Compatible with ggplot2 and allows full plot customization using ggplot2 modifiers such as theme().

Scientific Applications:

• Sequence Alignment Visualization: Generates simple visual representations of aligned biological sequences for analysis and presentation.

Methodology:

Minimal visualization approach implemented as a Bioconductor package with ggplot2-based rendering.