gmoviz
gmoviz visualises complex genomic editing events in genetically modified organisms and edited cell lines on a biologically-relevant scale.
Key Features:
- Genomic variation visualisation: Represents complex genomic editing events derived from DNA sequencing data and bioinformatics analyses.
- Biological context integration: Displays findings on a larger, biologically-relevant scale rather than isolated genomic coordinates.
Scientific Applications:
- GMO characterisation: Supports interpretation of genome editing outcomes in genetically modified organisms.
- Cell line analysis: Facilitates explanation of genomic modifications in edited cell lines used as research models.
Methodology:
Processes large volumes of DNA sequencing data generated through systematic genome characterisation, integrating outputs from various bioinformatics algorithms to produce visual representations of genomic editing events.
Collections
Details
- License:
- GPL-3.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/gmoviz