HubPub
HubPub provides functionality to create, populate, and manage Bioconductor Hub style packages and their associated metadata.
Key Features:
- Package Skeleton Creation: Generates a skeleton structure for Hub style packages that users populate with necessary information.
- Metadata Management: Provides functions to add resources to Hub package metadata files.
- Data Publishing: Supports publishing data to the Bioconductor S3 bucket.
Scientific Applications:
- Bioconductor Hub Infrastructure Development: Facilitates creation and maintenance of data packages for Bioconductor Hub structures.
- Large-Scale Data Distribution: Enables structured publication and access to biological datasets through Bioconductor's cloud-based storage infrastructure.
Methodology:
HubPub creates skeleton Hub style packages and provides functions to add resources to metadata files and publish data to the Bioconductor S3 bucket.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/HubPub