iSEEfier
iSEEfier streamlines the creation of initial configuration objects for launching iSEE instances with specified panel layouts and parameters.
Key Features:
- Configuration Object Creation: Generates initial configuration objects for iSEE sessions.
- Configuration Inspection: Enables examination of existing configuration objects.
- Configuration Combination: Supports merging multiple configuration objects together.
- Package Compatibility: Works with panel sets from iSEE and iSEEu packages.
- Extensibility: Accommodates custom panels from iSEEde, iSEEpathways, or user-developed panels.
Scientific Applications:
- Interactive Genomic Data Exploration: Facilitates setup of iSEE sessions for visual exploration of biological data sets.
- Reproducible Visualization Workflows: Enables consistent initialization of interactive visualization configurations across analyses.
Methodology:
iSEEfier generates configuration objects that are passed to the iSEE() function call to launch instances with predefined panel specifications.
Collections
Details
- License:
- MIT
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 8/30/2026
- Last Updated:
- 8/30/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/iSEEfierDownloads
- Source codehttps://github.com/NajlaAbassi/iSEEfier