iSEEhub
iSEEhub defines a custom landing page that enables iSEE apps to interface with the Bioconductor ExperimentHub for browsing, downloading, caching, and importing data sets.
Key Features:
- ExperimentHub Integration: The landing page connects directly to the Bioconductor ExperimentHub repository.
- Data Set Browsing: Users can browse available data sets within the ExperimentHub through the landing page interface.
- Download and Caching: Selected data sets are downloaded and cached locally for efficient reuse.
- Direct Import to iSEE: Data sets are imported directly into a Bioconductor iSEE app without manual file handling.
Scientific Applications:
- ExperimentHub Data Exploration: Facilitates interactive exploration of Bioconductor ExperimentHub data sets through the iSEE framework.
Methodology:
The package implements a custom landing page that interfaces with the Bioconductor ExperimentHub to browse, select, download, cache, and import data sets into iSEE apps.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 8/30/2026
- Last Updated:
- 8/30/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/iSEEhubDownloads
- Source codehttps://github.com/iSEE/iSEEhub