levi
levi integrates data from biological networks with transcriptomes, displaying a heatmap with surface curves to evidence the altered regions.
Key Features:
- Network-transcriptome integration: levi combines biological network data with transcriptome data for unified analysis.
- Heatmap visualization: levi generates heatmaps to represent integrated data.
- Surface curve rendering: levi overlays surface curves on heatmaps to highlight altered regions.
Scientific Applications:
- Altered region identification: levi enables detection of regions showing significant changes in expression within the context of biological networks.
Methodology:
The tool integrates data from biological networks with transcriptomes and displays a heatmap with surface curves to evidence the altered regions.
Collections
Details
- License:
- GPL-2.0-or-later
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/levi