LRBaseDbi

LRBaseDbi provides a DBI-based interface to construct LRBase annotation packages (LRBase.XXX.eg.db) for ligand-receptor interaction data.


Key Features:

  • LRBase Package Construction: Enables programmatic generation of species-specific LRBase annotation databases following the standard Bioconductor .eg.db package format.
  • DBI Interface: Implements database interface methods for storing and querying ligand-receptor pair annotations.

Scientific Applications:

  • Ligand-Receptor Interaction Analysis: Supports construction of reference databases for studying cell-cell communication through ligand-receptor pairs across different species.

Methodology:

The package uses DBI to provide a database interface for constructing LRBase.XXX.eg.db packages.

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Details

License:
Artistic-2.0
Tool Type:
command-line tool, library
Operating Systems:
Linux, Mac, Windows
Programming Languages:
R
Added:
9/1/2026
Last Updated:
9/1/2026

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