MesKit
MesKit provides analysis and visualization modules for mutational data generated by multi-region sequencing (MRS) to dissect cancer evolution from multi-region derived tumor biopsies via somatic alterations.
Key Features:
- Mutational profile depiction: Generates visual representations of mutational profiles from MRS data.
- Heterogeneity measurement: Quantifies heterogeneity within or between tumors from the same patient.
- Evolutionary dynamics tracking: Tracks evolutionary dynamics across tumor regions.
- Mutational pattern characterization: Characterizes mutational patterns at different biological levels.
Scientific Applications:
- Tumor heterogeneity interpretation: Facilitates interpretation of intra-tumor and inter-tumor heterogeneity in MRS studies.
- Evolutionary relationship analysis: Supports understanding of evolutionary relationships between spatially distinct tumor regions.
- Cancer evolution dissection: Enables investigation of cancer evolutionary processes from multi-region derived tumor biopsies.
Methodology:
MesKit analyzes somatic alteration data from multi-region sequencing to measure heterogeneity, track evolutionary dynamics, and characterize mutational patterns.
Collections
Details
- License:
- GPL-3.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/MesKit