methylCC
methylCC estimates the cell composition of DNA methylation whole blood samples measured on any platform technology including microarray and sequencing.
Key Features:
- Platform-agnostic estimation: methylCC estimates cell composition from DNA methylation data generated by microarray or sequencing technologies.
- Whole blood sample analysis: methylCC specifically estimates cell composition in DNA methylation whole blood samples.
Scientific Applications:
- Cell composition deconvolution: methylCC enables estimation of cell type proportions in heterogeneous whole blood DNA methylation samples across different measurement platforms.
Methodology:
The sources do not provide explicit methodological details beyond the estimation of cell composition from DNA methylation data.
Collections
Details
- License:
- GPL-3.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 10/2/2026
- Last Updated:
- 10/2/2026
Operations
Documentation
User manual
https://bioconductor.org/packages/methylCCDownloads
- Source codehttps://github.com/stephaniehicks/methylCC/