MicrobiomeProfiler

MicrobiomeProfiler performs functional enrichment analysis for microbiome data.


Key Features:

  • KEGG Enrichment Analysis: Supports enrichment analysis against the KEGG database.
  • COG Enrichment Analysis: Supports enrichment analysis against the Clusters of Orthologous Groups database.
  • Microbe-Disease Association Enrichment Analysis: Supports enrichment analysis for microbe-disease associations.
  • Metabo-Pathway Analysis: Supports metabolic pathway analysis.

Scientific Applications:

  • Microbiome Functional Enrichment Analysis: Enables functional interpretation of microbiome data through multiple enrichment approaches.

Methodology:

Based on clusterProfiler.

Collections

Details

License:
GPL-2.0
Tool Type:
command-line tool, library
Operating Systems:
Linux, Mac, Windows
Programming Languages:
R
Added:
9/1/2026
Last Updated:
9/1/2026

Operations

Publications

Documentation

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