MsBackendMassbank

MsBackendMassbank supports import and export of MS/MS library spectra from MassBank record files as a mass spectrometry data backend for the Spectra Bioconductor package.


Key Features:

  • MassBank Text File Backend: Handles data in plain MassBank text file format.
  • MassBank SQL Database Backend: Enables direct interaction with MassBank SQL databases.
  • Spectra Package Integration: Objects are designed for use with the Spectra Bioconductor package to add MassBank support.

Scientific Applications:

  • MS/MS Library Spectra Management: Facilitates import and export of tandem mass spectrometry reference spectra from MassBank repositories.
  • Mass Spectrometry Data Analysis Workflows: Enables integration of MassBank spectral data into Bioconductor-based mass spectrometry analysis pipelines.

Methodology:

The package implements backend objects that interface with either plain MassBank text files or MassBank SQL databases for data import and export operations.

Collections

Details

License:
Artistic-2.0
Tool Type:
command-line tool, library
Operating Systems:
Linux, Mac, Windows
Programming Languages:
R
Added:
8/30/2026
Last Updated:
8/30/2026

Operations

Publications

Documentation

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