MsDataHub
MsDataHub uses the ExperimentHub infrastructure to distribute raw mass spectrometry data files, peptide spectrum matches, and quantitative data from proteomics and metabolomics experiments.
Key Features:
- ExperimentHub Integration: MsDataHub leverages the ExperimentHub infrastructure for data distribution.
- Raw Mass Spectrometry Data Distribution: MsDataHub provides access to raw mass spectrometry data files.
- Peptide Spectrum Match Distribution: MsDataHub distributes peptide spectrum matches from proteomics experiments.
- Quantitative Data Distribution: MsDataHub distributes quantitative data from proteomics and metabolomics experiments.
Scientific Applications:
- Proteomics Data Access: MsDataHub enables retrieval of raw files, peptide spectrum matches, and quantitative data for proteomics analyses.
- Metabolomics Data Access: MsDataHub enables retrieval of quantitative data for metabolomics analyses.
Methodology:
MsDataHub uses the ExperimentHub infrastructure to distribute data.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 8/30/2026
- Last Updated:
- 8/30/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/MsDataHub