peakCombiner

peakCombiner curates and merges enriched genomic regions into consensus peak sets for downstream peak analyses.

Key Features:

• Modular functions: Functions allow optimization of input and output data.
• Multiple input formats: A broad range of accepted input data formats can be used to create a consensus peak set.
• Export options: Consensus peak sets can be exported to a file or used as the starting point for most downstream peak analyses.

Scientific Applications:

• Consensus peak generation: Creation of high-quality consensus peak lists from enriched genomic regions.
• Downstream analysis preparation: Consensus peak sets serve as starting points for most downstream peak analyses.

Methodology:

The package provides fully R based functions for curating and merging enriched genomic regions.