PIUMA
PIUMA offers a tidy pipeline of Topological Data Analysis frameworks to identify and characterize communities in high and heterogeneous dimensional data.
Key Features:
- Topological Data Analysis pipeline: Implements a tidy framework for analyzing high and heterogeneous dimensional data.
- Community detection: Identifies and characterizes communities within complex datasets.
Scientific Applications:
- Phenotype identification: Enables identification of phenotypes using Mapper from topological data analysis.
Methodology:
Mapper algorithm from topological data analysis.
Collections
Details
- License:
- GPL-3.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/PIUMADownloads
- Source codehttps://github.com/BioinfoMonzino/PIUMA