RiboCrypt

RiboCrypt enables interactive visualization and browsing of NGS data with transcript and genomic coordinate views, QC analysis, metaplots, differential translation plots, and gene expression plots.

Key Features:

• Transcript coordinate browser: Provides interactive visualization of NGS data in transcript coordinates.
• Genomic coordinate browser: Provides interactive visualization of NGS data in genomic coordinates.
• QC analysis: Includes quality control analysis for NGS data.
• Metaplots: Generates general metaplots for data summary and pattern visualization.
• Differential translation plots: Produces plots for analyzing differential translation.
• Gene expression plots: Generates plots for visualizing gene expression data.

Scientific Applications:

• NGS data exploration: Facilitates interactive browsing and visualization of next-generation sequencing datasets.
• Transcriptomic analysis: Supports examination of RNA sequencing data in both transcript and genomic contexts.
• Translation studies: Enables analysis of differential translation through specialized plotting functions.
• Gene expression analysis: Allows visualization of gene expression patterns from sequencing data.

Methodology:

The package is implemented as an R package for interactive visualization.