rigvf

rigvf provides an R interface to the IGVF Catalog for integrating data on the impact of genomic variants on function with Bioconductor resources.


Key Features:

  • IGVF Catalog Access: Provides programmatic access to data on the impact of genomic variants on function from the IGVF Catalog.
  • Bioconductor Integration: Enables integration of IGVF Catalog data with Bioconductor resources and workflows.

Scientific Applications:

  • Variant Function Analysis: Supports research investigating how genomic variants affect molecular and cellular function through access to curated catalog data.
  • Genomic Data Integration: Facilitates incorporation of variant functional impact data into R-based bioinformatics pipelines and analyses.

Methodology:

The package implements an R programming interface to query and retrieve data from the IGVF Catalog.

Collections

Details

License:
MIT
Tool Type:
command-line tool, library
Operating Systems:
Linux, Mac, Windows
Programming Languages:
R
Added:
8/30/2026
Last Updated:
10/18/2026

Operations

Publications

Documentation

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