scDataviz

scDataviz provides single cell data visualization and downstream analyses for flow cytometry, mass cytometry, and single-cell RNA-seq (scRNA-seq) data.

Key Features:

• SingleCellExperiment integration: The package is based on SingleCellExperiment, enabling flexible and compatible workflows.
• ggplot-based graphics: Visualizations are generated via the ggplot engine, allowing users to add on features.

Scientific Applications:

• Flow cytometry analysis: Supports data visualization and downstream analysis of flow cytometry data.
• Mass cytometry analysis: Supports data visualization and downstream analysis of mass cytometry data.
• Single-cell RNA-seq analysis: Supports data visualization and downstream analysis of scRNA-seq data.

Methodology:

The package is built on SingleCellExperiment and generates graphics via the ggplot engine.