scToppR
scToppR wraps the ToppGene web platform API for gene ontology and functional enrichment research in R.
Key Features:
- ToppGene API Access: Provides programmatic access to the ToppGene web platform for gene ontology and functional enrichment analysis.
- Visualization Integration: Integrates visualization tools for enrichment results.
- Results Export: Saves results into different formats.
Scientific Applications:
- Gene Ontology Analysis: Supports gene ontology and functional enrichment research through direct API access to ToppGene.
Methodology:
API wrapper for the ToppGene web platform.
Collections
Details
- License:
- MIT
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 8/30/2026
- Last Updated:
- 8/30/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/scToppR