singIST
singIST provides toolkits to implement a full singIST analysis with pseudobulked Seurat objects of disease models and human data.
Key Features:
- Comparative single-cell transcriptomics: Enables comparison between disease models and a human condition using pseudobulked Seurat objects.
- singIST analysis implementation: Provides complete toolkits for executing the full singIST analytical workflow.
Scientific Applications:
- Disease model evaluation: Supports comparative analysis of single-cell transcriptomic data between experimental disease models and human patient data.
Methodology:
Analysis uses pseudobulked Seurat objects as input for disease models and human data.
Collections
Details
- License:
- MIT
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 8/30/2026
- Last Updated:
- 8/30/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/singIST